Commit 2c1357b8 authored by Romulo Pereira Goncalves's avatar Romulo Pereira Goncalves
Browse files

Fix the paths and run with the latest interactive interface.

parent c830b777
Pipeline #24143 passed with stage
in 5 seconds
......@@ -29,35 +29,14 @@
"metadata": {},
"outputs": [],
"source": [
"install_dependencies <- TRUE"
"install_dependencies <- FALSE"
]
},
{
"cell_type": "code",
"execution_count": 2,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"Installing package into ‘/home/romulo/R/x86_64-pc-linux-gnu-library/4.1’\n",
"(as ‘lib’ is unspecified)\n",
"\n",
"Installing package into ‘/home/romulo/R/x86_64-pc-linux-gnu-library/4.1’\n",
"(as ‘lib’ is unspecified)\n",
"\n",
"Warning message in install.packages(\"https://cran.r-project.org/src/contrib/Archive/sf/sf_0.8-1.tar.gz\", :\n",
"“installation of package ‘/tmp/RtmpIN1CNM/downloaded_packages/sf_0.8-1.tar.gz’ had non-zero exit status”\n",
"Installing package into ‘/home/romulo/R/x86_64-pc-linux-gnu-library/4.1’\n",
"(as ‘lib’ is unspecified)\n",
"\n",
"Installing package into ‘/home/romulo/R/x86_64-pc-linux-gnu-library/4.1’\n",
"(as ‘lib’ is unspecified)\n",
"\n"
]
}
],
"outputs": [],
"source": [
"if (install_dependencies == TRUE) {\n",
" install.packages(\"remotes\")\n",
......@@ -79,94 +58,18 @@
},
{
"cell_type": "code",
"execution_count": 7,
"execution_count": 3,
"metadata": {},
"outputs": [],
"source": [
"from_sources <- FALSE"
"from_sources <- TRUE"
]
},
{
"cell_type": "code",
"execution_count": 8,
"execution_count": 4,
"metadata": {},
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"Downloading git repo https://git.gfz-potsdam.de/habitat-sampler/HabitatSampler.git\n",
"\n",
"'/usr/bin/git' clone --depth 1 --no-hardlinks https://git.gfz-potsdam.de/habitat-sampler/HabitatSampler.git /tmp/RtmpJi3IZU/file73fda5b6babb2\n",
"\n",
"'/usr/bin/git' fetch origin documentation\n",
"\n",
"'/usr/bin/git' checkout FETCH_HEAD\n",
"\n",
"Downloading package from url: https://cran.r-project.org/src/contrib/Archive/velox/velox_0.2.0.tar.gz\n",
"\n"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"\u001b[32m✔\u001b[39m \u001b[90mchecking for file ‘/tmp/RtmpJi3IZU/remotes73fda564c25c8/velox/DESCRIPTION’\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mpreparing ‘velox’:\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[32m✔\u001b[39m \u001b[90mchecking DESCRIPTION meta-information\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mcleaning src\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mchecking for LF line-endings in source and make files and shell scripts\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mchecking for empty or unneeded directories\u001b[39m\u001b[36m\u001b[39m\n",
" Omitted ‘LazyData’ from DESCRIPTION\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mbuilding ‘velox_0.2.0.tar.gz’\u001b[39m\u001b[36m\u001b[39m\n",
" \n",
"\r"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"Installing package into ‘/home/romulo/R/x86_64-pc-linux-gnu-library/4.1’\n",
"(as ‘lib’ is unspecified)\n",
"\n",
"Installing 4 packages: spdep, leafem, spatialEco, geojsonio\n",
"\n",
"Installing packages into ‘/home/romulo/R/x86_64-pc-linux-gnu-library/4.1’\n",
"(as ‘lib’ is unspecified)\n",
"\n",
"Downloading package from url: https://cran.r-project.org/src/contrib/Archive/velox/velox_0.2.0.tar.gz\n",
"\n",
"Skipping velox, it is already being installed\n",
"\n"
]
},
{
"name": "stdout",
"output_type": "stream",
"text": [
"\u001b[32m✔\u001b[39m \u001b[90mchecking for file ‘/tmp/RtmpJi3IZU/file73fda5b6babb2/R-package/DESCRIPTION’\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mpreparing ‘HaSa’:\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[32m✔\u001b[39m \u001b[90mchecking DESCRIPTION meta-information\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90minstalling the package to build vignettes\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[32m✔\u001b[39m \u001b[90mcreating vignettes\u001b[39m\u001b[36m\u001b[36m (2.5s)\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mchecking for LF line-endings in source and make files and shell scripts\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mchecking for empty or unneeded directories\u001b[39m\u001b[36m\u001b[39m\n",
"\u001b[90m─\u001b[39m\u001b[90m \u001b[39m\u001b[90mbuilding ‘HaSa_1.3.0.tar.gz’\u001b[39m\u001b[36m\u001b[39m\n",
" \n",
"\r"
]
},
{
"name": "stderr",
"output_type": "stream",
"text": [
"Installing package into ‘/home/romulo/R/x86_64-pc-linux-gnu-library/4.1’\n",
"(as ‘lib’ is unspecified)\n",
"\n"
]
}
],
"outputs": [],
"source": [
"if (from_sources == TRUE) {\n",
" wd<-\"./\"\n",
......@@ -178,6 +81,8 @@
" source(paste(inPath,\"model_opt.r\",sep=\"\"))\n",
" source(paste(inPath,\"plot_results.r\",sep=\"\"))\n",
" source(paste(inPath,\"plot_interactive.r\",sep=\"\"))\n",
" source(paste(inPath,\"save_files.r\",sep=\"\"))\n",
" source(paste(inPath,\"utils.r\",sep=\"\"))\n",
"} else {\n",
" library(remotes)\n",
" remotes::install_git(\n",
......@@ -204,9 +109,692 @@
},
{
"cell_type": "code",
"execution_count": null,
"execution_count": 5,
"metadata": {},
"outputs": [],
"outputs": [
{
"name": "stderr",
"output_type": "stream",
"text": [
"Loading required package: sp\n",
"\n",
"rgdal: version: 1.4-8, (SVN revision 845)\n",
" Geospatial Data Abstraction Library extensions to R successfully loaded\n",
" Loaded GDAL runtime: GDAL 3.1.0, released 2020/05/03\n",
" Path to GDAL shared files: \n",
" GDAL binary built with GEOS: FALSE \n",
" Loaded PROJ.4 runtime: Rel. 7.2.1, January 1st, 2021, [PJ_VERSION: 721]\n",
" Path to PROJ.4 shared files: /home/romulo/gitlab/python-setup-ubuntu/python/opt/share/proj\n",
" Linking to sp version: 1.4-1 \n",
"\n",
"Warning message:\n",
"“no function found corresponding to methods exports from ‘raster’ for: ‘wkt’”\n",
"Checking rgeos availability: TRUE\n",
"\n",
"Warning message:\n",
"“'units::install_conversion_constant' is deprecated.\n",
"Use 'install_unit' instead.\n",
"See help(\"Deprecated\")”\n",
"Warning message:\n",
"“'units::install_conversion_constant' is deprecated.\n",
"Use 'install_unit' instead.\n",
"See help(\"Deprecated\")”\n",
"Warning message:\n",
"“'units::install_conversion_constant' is deprecated.\n",
"Use 'install_unit' instead.\n",
"See help(\"Deprecated\")”\n",
"Warning message:\n",
"“'units::install_conversion_constant' is deprecated.\n",
"Use 'install_unit' instead.\n",
"See help(\"Deprecated\")”\n",
"Warning message:\n",
"“'units::install_conversion_constant' is deprecated.\n",
"Use 'install_unit' instead.\n",
"See help(\"Deprecated\")”\n",
"\n",
"Attaching package: ‘spatialEco’\n",
"\n",
"\n",
"The following object is masked from ‘package:raster’:\n",
"\n",
" shift\n",
"\n",
"\n",
"randomForest 4.6-14\n",
"\n",
"Type rfNews() to see new features/changes/bug fixes.\n",
"\n",
"\n",
"Attaching package: ‘randomForest’\n",
"\n",
"\n",
"The following object is masked from ‘package:spatialEco’:\n",
"\n",
" combine\n",
"\n",
"\n",
"\n",
"Attaching package: ‘e1071’\n",
"\n",
"\n",
"The following object is masked from ‘package:raster’:\n",
"\n",
" interpolate\n",
"\n",
"\n",
"Loading required package: usethis\n",
"\n",
"Warning message in fun(libname, pkgname):\n",
"“rgeos: versions of GEOS runtime 3.9.0-CAPI-1.16.2\n",
"and GEOS at installation 3.7.0-CAPI-1.11.0differ”\n",
"rgeos version: 0.5-5, (SVN revision 640)\n",
" GEOS runtime version: 3.9.0-CAPI-1.16.2 \n",
" Linking to sp version: 1.4-1 \n",
" Polygon checking: TRUE \n",
"\n",
"\n"
]
},
{
"data": {
"text/html": [
"<ol>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'e1071'</li><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'devtools'</li><li>'usethis'</li><li>'e1071'</li><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'velox'</li><li>'devtools'</li><li>'usethis'</li><li>'e1071'</li><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'rgeos'</li><li>'velox'</li><li>'devtools'</li><li>'usethis'</li><li>'e1071'</li><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'leaflet'</li><li>'rgeos'</li><li>'velox'</li><li>'devtools'</li><li>'usethis'</li><li>'e1071'</li><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'htmlwidgets'</li><li>'leaflet'</li><li>'rgeos'</li><li>'velox'</li><li>'devtools'</li><li>'usethis'</li><li>'e1071'</li><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"\t<li><style>\n",
".list-inline {list-style: none; margin:0; padding: 0}\n",
".list-inline>li {display: inline-block}\n",
".list-inline>li:not(:last-child)::after {content: \"\\00b7\"; padding: 0 .5ex}\n",
"</style>\n",
"<ol class=list-inline><li>'IRdisplay'</li><li>'htmlwidgets'</li><li>'leaflet'</li><li>'rgeos'</li><li>'velox'</li><li>'devtools'</li><li>'usethis'</li><li>'e1071'</li><li>'randomForest'</li><li>'spatialEco'</li><li>'maptools'</li><li>'raster'</li><li>'rgdal'</li><li>'sp'</li><li>'stats'</li><li>'graphics'</li><li>'grDevices'</li><li>'utils'</li><li>'datasets'</li><li>'methods'</li><li>'base'</li></ol>\n",
"</li>\n",
"</ol>\n"
],
"text/latex": [
"\\begin{enumerate}\n",
"\\item \\begin{enumerate*}\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'e1071'\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'devtools'\n",
"\\item 'usethis'\n",
"\\item 'e1071'\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'velox'\n",
"\\item 'devtools'\n",
"\\item 'usethis'\n",
"\\item 'e1071'\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'rgeos'\n",
"\\item 'velox'\n",
"\\item 'devtools'\n",
"\\item 'usethis'\n",
"\\item 'e1071'\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'leaflet'\n",
"\\item 'rgeos'\n",
"\\item 'velox'\n",
"\\item 'devtools'\n",
"\\item 'usethis'\n",
"\\item 'e1071'\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'htmlwidgets'\n",
"\\item 'leaflet'\n",
"\\item 'rgeos'\n",
"\\item 'velox'\n",
"\\item 'devtools'\n",
"\\item 'usethis'\n",
"\\item 'e1071'\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\item \\begin{enumerate*}\n",
"\\item 'IRdisplay'\n",
"\\item 'htmlwidgets'\n",
"\\item 'leaflet'\n",
"\\item 'rgeos'\n",
"\\item 'velox'\n",
"\\item 'devtools'\n",
"\\item 'usethis'\n",
"\\item 'e1071'\n",
"\\item 'randomForest'\n",
"\\item 'spatialEco'\n",
"\\item 'maptools'\n",
"\\item 'raster'\n",
"\\item 'rgdal'\n",
"\\item 'sp'\n",
"\\item 'stats'\n",
"\\item 'graphics'\n",
"\\item 'grDevices'\n",
"\\item 'utils'\n",
"\\item 'datasets'\n",
"\\item 'methods'\n",
"\\item 'base'\n",
"\\end{enumerate*}\n",
"\n",
"\\end{enumerate}\n"
],
"text/markdown": [
"1. 1. 'rgdal'\n",
"2. 'sp'\n",
"3. 'stats'\n",
"4. 'graphics'\n",
"5. 'grDevices'\n",
"6. 'utils'\n",
"7. 'datasets'\n",
"8. 'methods'\n",
"9. 'base'\n",
"\n",
"\n",
"\n",
"2. 1. 'raster'\n",
"2. 'rgdal'\n",
"3. 'sp'\n",
"4. 'stats'\n",
"5. 'graphics'\n",
"6. 'grDevices'\n",
"7. 'utils'\n",
"8. 'datasets'\n",
"9. 'methods'\n",
"10. 'base'\n",
"\n",
"\n",
"\n",
"3. 1. 'maptools'\n",
"2. 'raster'\n",
"3. 'rgdal'\n",
"4. 'sp'\n",
"5. 'stats'\n",
"6. 'graphics'\n",
"7. 'grDevices'\n",
"8. 'utils'\n",
"9. 'datasets'\n",
"10. 'methods'\n",
"11. 'base'\n",
"\n",
"\n",
"\n",
"4. 1. 'spatialEco'\n",
"2. 'maptools'\n",
"3. 'raster'\n",
"4. 'rgdal'\n",
"5. 'sp'\n",
"6. 'stats'\n",
"7. 'graphics'\n",
"8. 'grDevices'\n",
"9. 'utils'\n",
"10. 'datasets'\n",
"11. 'methods'\n",
"12. 'base'\n",
"\n",
"\n",
"\n",
"5. 1. 'randomForest'\n",
"2. 'spatialEco'\n",
"3. 'maptools'\n",
"4. 'raster'\n",
"5. 'rgdal'\n",
"6. 'sp'\n",
"7. 'stats'\n",
"8. 'graphics'\n",
"9. 'grDevices'\n",
"10. 'utils'\n",
"11. 'datasets'\n",
"12. 'methods'\n",
"13. 'base'\n",
"\n",
"\n",
"\n",
"6. 1. 'e1071'\n",
"2. 'randomForest'\n",
"3. 'spatialEco'\n",
"4. 'maptools'\n",
"5. 'raster'\n",
"6. 'rgdal'\n",
"7. 'sp'\n",
"8. 'stats'\n",
"9. 'graphics'\n",
"10. 'grDevices'\n",
"11. 'utils'\n",
"12. 'datasets'\n",
"13. 'methods'\n",
"14. 'base'\n",
"\n",
"\n",
"\n",
"7. 1. 'devtools'\n",
"2. 'usethis'\n",
"3. 'e1071'\n",
"4. 'randomForest'\n",
"5. 'spatialEco'\n",
"6. 'maptools'\n",
"7. 'raster'\n",
"8. 'rgdal'\n",
"9. 'sp'\n",
"10. 'stats'\n",
"11. 'graphics'\n",
"12. 'grDevices'\n",
"13. 'utils'\n",
"14. 'datasets'\n",