diff --git a/CITATION b/CITATION index 75ffa97e2ae57eeaa4b9209ddd3aae8762ca9f52..4c51de441bdcb9aa222855180a848eb40344a55e 100644 --- a/CITATION +++ b/CITATION @@ -14,8 +14,8 @@ Here are the BibTex entries for LaTeX users: @misc{LYNXApp, author = {Jacquey, Antoine B. and Cacace, Mauro}, title = {{LYNX: Lithosphere dYnamic Numerical toolboX, a MOOSE-based application}}, - month = jul, - year = 2019, + month = {jul}, + year = {2019}, doi = {10.5281/zenodo.3355376}, url = {https://doi.org/10.5281/zenodo.3355376} } \ No newline at end of file diff --git a/doc/content/application_development/damage_rheology.md b/doc/content/application_development/damage_rheology.md index 11451b98a7324f487c608e2909e191a4477f3900..08fcf04778f71d53705c543bc8cbc38bb5dae1c2 100644 --- a/doc/content/application_development/damage_rheology.md +++ b/doc/content/application_development/damage_rheology.md @@ -4,7 +4,7 @@ Here we describe the base for the damage rheology implementation in LYNX. ## Stress update -We rely of the elastic energy and stress formulation of [cite:lyakhovsky1997]: +We rely of the elastic energy and stress formulation of [!cite](lyakhovsky1997): \begin{equation} \sigma_{ij} = \left(\lambda - \frac{\alpha \gamma}{\xi}\right) \varepsilon_{kk} \delta_{ij} + \left(2G - \alpha \gamma \left(\xi - 2\xi_{0}\right)\right) \varepsilon_{ij}. @@ -47,7 +47,7 @@ The parameter $\xi_{0}$ represents the modified internal friction of the materia ## Inelastic model -In LYNX, we rely on a different formulation as the one presented in [cite:lyakhovsky1997,lyakhovsky2015] for the inelastic update. The yield function presented in [cite:lyakhovsky2015] reads: +In LYNX, we rely on a different formulation as the one presented in [!cite](lyakhovsky1997,lyakhovsky2015) for the inelastic update. The yield function presented in [!cite](lyakhovsky2015) reads: \begin{equation} f = D\varepsilon_{v}^{3} + {\lVert \varepsilon_{ij} \rVert}^{2} \left(\xi - \xi_{0}\right) diff --git a/doc/content/application_development/identities.md b/doc/content/application_development/identities.md index 9ca043f4398a746a53a62d3bc204806ffa5c2a4c..bd360e7d50c22dab1f3404c9e18ed9e7f76eb132 100644 --- a/doc/content/application_development/identities.md +++ b/doc/content/application_development/identities.md @@ -1,6 +1,6 @@ ## Some identities -In the following description, we make use of the following identities extended from [cite:dunne2005]. +In the following description, we make use of the following identities extended from [!cite](dunne2005). Stress invariants: diff --git a/doc/content/application_development/plasticity.md b/doc/content/application_development/plasticity.md index e87b66a0bcbbfeaefcbe825fc65c5cdd982ba729..2b08b36f716fa3501f9f1bba6d28de0df016d06a 100644 --- a/doc/content/application_development/plasticity.md +++ b/doc/content/application_development/plasticity.md @@ -51,7 +51,7 @@ Using Eq. 3, the plastic increment can be written: ## Tangent operator modulus -Here we extend the tangent operator modulus given in [cite:dunne2005] to account for volumetric deformation and non-associative models. +Here we extend the tangent operator modulus given in [!cite](dunne2005) to account for volumetric deformation and non-associative models. The tangent operator modulus is defined as: \begin{equation} diff --git a/doc/content/documentation.menu.md b/doc/content/documentation.menu.md index 61fdb0afbff7f7399edaf59dc15d2d33f2685570..4bd5456beecdd4da2cbb993c9b945ed768fb7903 100644 --- a/doc/content/documentation.menu.md +++ b/doc/content/documentation.menu.md @@ -7,6 +7,10 @@ !col! class=s12 m6 l4 ## [Application Development](application_development/index.md) + +- [Plasticity](application_development/plasticity.md) +- [Viscoplasticity](application_development/viscoplasticity.md) +- [Damage rheology](application_development/damage_rheology.md) !col-end! !col! class=s12 m6 l4 diff --git a/doc/content/examples/index.md b/doc/content/examples/index.md index 5b63c734f042e965ada8d73fb5ce0e99e731c5c7..c1375f78370a7fcd038a49123790e1a335dcce48 100644 --- a/doc/content/examples/index.md +++ b/doc/content/examples/index.md @@ -1,7 +1,3 @@ # Examples -- [Frequently Asked Questions](help/faq.md) -- [Troubleshooting](help/troubleshooting.md) -- [Developer Tools](help/development/index.md) -- [GFZ Linux cluster usage](help/glicconnectivity.md) -- [Contact Us](help/contact_us.md) +Here we will put some examples